Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs17750424 | chr6:27701122 | T/C | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs17750747 | chr6:27730334 | T/C | 1.98E-7 | 213 | 16.47 | 13.6 | 9.77 | KM Plot |
| KIRP | rs17751184 | chr6:27775028 | C/T | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs17763089 | chr6:27835218 | G/A | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs17821086 | chr15:58461738 | A/T | 1.5E-5 | 213 | 14.85 | 19.53 | 11.7 | KM Plot |
| KIRP | rs17834014 | chr14:59816026 | A/G | 0.000122 | 211 | 15.1 | 18.7 | 11.2 | KM Plot |
| KIRP | rs1785274 | chr18:3304921 | C/G | 0.000634 | 207 | 18.23 | 14.48 | 10.83 | KM Plot |
| KIRP | rs17879291 | chr16:4526104 | C/T | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs1805316 | chr9:116153250 | C/T | 5.61E-7 | 214 | 4.07 | 16.48 | 16.43 | KM Plot |
| KIRP | rs1815786 | chr11:116921390 | T/C | 0.000207 | 211 | 11.43 | 16.47 | 16.43 | KM Plot |
| KIRP | rs181713850 | chr16:47714464 | C/G | 7.92E-8 | 214 | 17.2 | 12.9 | 10.83 | KM Plot |
| KIRP | rs182056511 | chr17:80743120 | A/G | 9.94E-5 | 208 | 15.88 | 17.6 | 15.15 | KM Plot |
| KIRP | rs1824837 | chr5:79961241 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1824838 | chr5:79961312 | C/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs1824839 | chr5:79961362 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |